Ok, I don't think the problem is actually the thermostat in this case, but I've gotta be all get-off-my-lawn about something!
My friend has a fairly standard furnace/AC unit on which we installed a Nest thermostat a while back. It had the regular fan, heat, and cooling wires connected as well as the C and Rh wires. It was working fine for a year or two until the end of last week when it started giving the "delayed for xx:xx" message. From everything I can find, that means that the internal battery is low and it needs to charge itself to avoid over-cycling the compressor. The most common cause for that was not having a C wire hooked up, according to my perusal of the internet. At the time, I didn't remember what I had done when I installed it and I didn't have time to go over and look at it, so I told her to order up a 24v AC-AC transformer.
I went over today and installed it and found that there was already a C and an Rh pair connected, coming from the unit, right off the control board. Okay, weird, but maybe it's just not enough voltage or... hell, I don't know anything about how this is supposed to work but I've got this transformer, so what the heck. I disconnected the power coming from the furnace and connected the transformer to the Nest. When I plugged the thermostat back in, I ran through the system test and it was able to turn the blower on and off, but then did not turn on the A/C when I tried the cooling test. I popped the breakers off and back on, and still nothing.
Connecting the C and Rh wires back to the furnace's wires and removing the add-on transformer, everything works fine. Swap everything back and the system will turn the blower on and off for the Fan test, but then nothing else. Come to think of it, I didn't think to try a different test first, but that would have been an interesting data point.
I was under the impression - and I freely admit it may be an incorrect one! - that the line coming from the furnace to the thermostat is power delivery only? Is it somehow backfeeding power from the Nest to run the furnace controls and draining the battery in the process? Is there an HVAC electrician in the house that can illuminate me?
edit: okay, so as I think about it, the three wires going to the control board are isolated here and I don't have any thing from the furnace to complete the circuit, so of course that doesn't work. Am I supposed to double up the transformer and the Rh? If I connect one to Rh and one to Rc, it seems like the Nest will jump them internally anyway....